SOFT : shiver
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Site du soft: https://github.com/ChrisHIV/shiver
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/shiver
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Load binaries and environment:
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-> Version v1.5.8

#Need Python-2.7.15,samtools, mafft,blast>2.2.28, trimmomatic, smalt or bwa or bowtie
module load system/Python-2.7.15 bioinfo/samtools-1.16.1 bioinfo/mafft-7.487 bioinfo/ncbi-blast-2.13.0+ bioinfo/Trimmomatic-0.38 bioinfo/smalt-0.7.6 bioinfo/bwa-0.7.17 bioinfo/bowtie2-2.4.4

module load bioinfo/shiver-v1.5.8

Example directory for use on cluster:
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/usr/local/bioinfo/src/shiver/example_on_cluster

To submit: sbatch test_shiver-v1.5.8.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.