SOFT : runBNG
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Site du soft: https://github.com/AppliedBioinformatics/runBNG
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/runBNG
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Load binaries and environment:
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-> Version v2.0.1

#Need Python3 and R
module load system/Python-3.6.3 system/R-3.4.3

module load bioinfo/runBNG-v2.0.1

Bionano Solve Folder: /usr/local/bioinfo/src/runBNG/runBNG-v2.0.1/tools/tools/pipeline/1.0/
Bionano RefAligner folder:  /usr/local/bioinfo/src/runBNG/runBNG-v2.0.1/tools/pipeline/1.0/RefAligner/1.0/

Example directory for use on cluster:
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/usr/local/bioinfo/src/runBNG/example_on_cluster

To submit: sbatch test_runBNG-v2.0.1.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.