SOFT : pyani
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Site du soft: https://github.com/widdowquinn/pyani
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/pyani
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Load binaries and environment:
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-> Version v0.2.10

#Need Miniconda3-4.7.10
module load system/Miniconda3-4.7.10
module load bioinfo/pyani-v0.2.10

Be careful, to unload, not use module purge but in order:

module unload bioinfo/pyani-v0.2.10
module unload system/Miniconda3-4.7.10


#Warning! By default all cpu are used on the node. Don't forget to adjust --workers option  and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/pyani/example_on_cluster

To submit: sbatch test_pyani-v0.2.10.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.