SOFT : lcMLkin
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Site du soft: https://github.com/COMBINE-lab/maximum-likelihood-relatedness-estimation
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LICENSE:
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NC

See software documentation for more informations.

Location: /usr/local/bioinfo/src/lcMLkin
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Load binaries and environment:
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-> Version 8ec5bbe

#If need Python forSNPbam2vcf.py
module load system/Python-2.7.2

module load bioinfo/lcMLkin-8ec5bbe

#Warning! By default all cpu are used on the node. Don't forget to adjust -t option of lcmlkin command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/lcMLkin/example_on_cluster

To submit: sbatch test_lcMLkin-8ec5bbe.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.