SOFT : graphtyper
------
Site du soft: https://github.com/DecodeGenetics/graphtyper
-------------

LICENSE:
--------

MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/graphtyper
---------

Load binaries and environment:
------------------------------

-> Version v2.7.2

#Need Miniconda
module load system/Miniconda3
module load bioinfo/graphtyper-v2.7.2

To unload module, unload in order:

module unload bioinfo/graphtyper-v2.7.2
module unload system/Miniconda3

Warning! By default 64 cpu are used on the node. Don't forget to adjust --threads option of graphtyper command and --cpus-per-task option for Slurm.


Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/graphtyper/example_on_cluster

To submit: sbatch test_graphtyper-v2.7.2.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.