SOFT : adegenet
------
Site du soft: http://adegenet.r-forge.r-project.org/
-------------

LICENSE:
--------

GPL (>=2)

See software documentation for more informations.

Location: /usr/local/bioinfo/src/adegenet
---------

Load binaries and environment:
------------------------------

-> Version 2.1.2

The best way to have it available is to compile and install it as your own R local librarie (located under your $HOME/R folder)
This R package requires gdal and proj system libraries, available on the plateforme, but only compatible with R-3.5.2.
Thus, you will need first to load these environments from your shell prompt:
 module load system/R-3.5.2
 module load libraries/gdal-2.3.0
 module load libraries/proj-4.9.3

Then, after launching R, install it (only needed once before first use) as local (anwser yes for local installation, and choose Montpellier for CRAN miror):
 install.packages('adegenet')
 
To use it (still in R and having modules loaded):
 library("adegenet")

Help for use
-----------


See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.