SOFT : Unicycler
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Site du soft: https://github.com/rrwick/Unicycler/release
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Unicycler
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Load binaries and environment:
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-> Version v0.4.6

#Need gcc-4.9.1 + dependancies
module load compiler/gcc-4.9.1 bioinfo/SPAdes-3.11.1 bioinfo/racon-v1.3.1 bioinfo/pilon-v1.22 bioinfo/bowtie2-2.3.3.1 bioinfo/samtools-1.8 bioinfo/ncbi-blast-2.6.0+

module load bioinfo/Unicycler-0.4.6

-> Version v0.4.8

#Need gcc-4.9.1 + dependancies
module load compiler/gcc-4.9.1 bioinfo/SPAdes-3.11.1 bioinfo/racon-v1.3.1 bioinfo/pilon-v1.22 bioinfo/bowtie2-2.3.3.1 bioinfo/samtools-1.8 bioinfo/ncbi-blast-2.10.0+

module load bioinfo/Unicycler-0.4.8

-> Version v0.4.9

#Need gcc-9.3.0 + dependancies
module load compiler/gcc-9.3.0 bioinfo/SPAdes-3.11.1 bioinfo/racon-v1.3.1 bioinfo/pilon-v1.22 bioinfo/bowtie2-2.3.3.1 bioinfo/samtools-1.8 bioinfo/ncbi-blast-2.10.0+

module load bioinfo/Unicycler-0.4.9


Example directory for use on cluster:
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/usr/local/bioinfo/src/Unicycler/example_on_cluster

To submit: sbatch test_Unicycler-0.4.6.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.