SOFT : TEsorter
------
Site du soft: https://github.com/zhangrengang/TEsorter
-------------

LICENSE:
--------

GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/TEsorter
---------

Load binaries and environment:
------------------------------

-> Version v1.2.5

#Need Python-2.7.2, HMMER, Blast+ 
module load system/Python-2.7.2 bioinfo/hmmer-3.2.1 bioinfo/ncbi-blast-2.10.1+

module load bioinfo/TEsorter-1.2.5

Warning! By default all cpu are used on the node. Don't forget to adjust -p option of TEsorter.py command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/TEsorter/example_on_cluster

To submit: sbatch test_TEsorter-1.2.5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.