SOFT : Supernova
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Site du soft: https://support.10xgenomics.com/de-novo-assembly/software/overview/welcome
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LICENSE:
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10x Genomics End User Software License Agreement: https://support.10xgenomics.com/de-novo-assembly/software/downloads/latest

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Supernova
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Load binaries and environment:
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-> Version v1.2.2

module load bioinfo/bcl2fastq-2.20.0
module load bioinfo/supernova-1.2.2

-> Version v2.0.0

module load bioinfo/bcl2fastq-2.20.0
module load bioinfo/supernova-2.0.0

-> Version v2.0.1

module load bioinfo/bcl2fastq-2.20.0
module load bioinfo/supernova-2.0.1

-> Version 2.1.1

module load bioinfo/bcl2fastq-2.20.0
module load bioinfo/supernova-2.1.1


Example directory for use on cluster:
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/usr/local/bioinfo/src/Supernova/example_on_cluster

To submit:

sbatch test_supernova-1.2.2.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.