SOFT : SOAPdenovo
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Site du soft: http://soap.genomics.org.cn/soapdenovo.html + https://github.com/aquaskyline/SOAPdenovo2
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SOAPdenovo
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Load binaries and environment:
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-> Version SOAPdenovo2-r240

module load bioinfo/SOAPdenovo2-r240
or use absolute path:
/usr/local/bioinfo/src/SOAPdenovo/SOAPdenovo2-bin-LINUX-generic-r240/


-> Version SOAPdenovo2-r241

module load bioinfo/SOAPdenovo2-r241
or use absolute path:
/usr/local/bioinfo/src/SOAPdenovo/SOAPdenovo2-r241/



Example directory for use on cluster:
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/usr/local/bioinfo/src/SOAPdenovo/example_on_cluster

To submit:

sbatch test_SOAPdenovo2-r240.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.