SOFT : SMC++
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Site du soft: https://github.com/popgenmethods/smcpp
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SMC++
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Load binaries and environment:
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-> Version v1.15.2

#Need Miniconda
module load system/Miniconda3-4.4.10

module load bioinfo/smcpp-v1.15.2

Be careful, to unload, not use module purge but in order:

module unload bioinfo/smcpp-v1.15.2
module unload system/Miniconda3-4.4.10

(Warning message can be ignored: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated.)

Example directory for use on cluster:
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/usr/local/bioinfo/src/SMC++/example_on_cluster

To submit: sbatch test_smcpp-v1.15.2.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.