SOFT : SICER2
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Site du soft: https://github.com/zanglab/SICER2
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SICER2
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Load binaries and environment:
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-> Version v1.0.3

#If need bedtools
module load bioinfo/bedtools2-2.29.0

module load bioinfo/SICER2-v1.0.3

Warning! By default all cpu are used on the node. Don't forget to adjust -cpu option of SICER2 commands and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/SICER2/example_on_cluster

To submit: sbatch test_SICER2-v1.0.3.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.