SOFT : Roary
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Site du soft: https://sanger-pathogens.github.io/Roary/
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Roary
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Load binaries and environment:
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-> Version v3.12.0

module load bioinfo/Roary-3.12.0

#If need kraken:
module load bioinfo/kraken-1.1

#If need R (plot)
module  load system/R-3.4.3


-> Version v3.13.0

module load bioinfo/Roary-3.13.0

#If need kraken:
module load bioinfo/kraken-1.1

#If need R (plot)
module  load system/R-3.4.3


(Ignore error " Use of uninitialized value in require at .. Encode.pm". -> https://github.com/sanger-pathogens/Roary/issues/345)

Example directory for use on cluster:
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/usr/local/bioinfo/src/Roary/example_on_cluster

To submit: sbatch test_Roary-3.12.0.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.