SOFT : RetroSeq
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Site du soft: https://github.com/tk2/RetroSeq
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LICENSE:
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NC

See software documentation for more informations.

Location: /usr/local/bioinfo/src/RetroSeq
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Load binaries and environment:
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-> Version v1.5

#Need bedtools package, samtools <=0.1.19, Exonerate,
module load bioinfo/bedtools-2.27.1 bioinfo/samtools-0.1.19 bioinfo/exonerate-2.2.0

module load bioinfo/RetroSeq-1.5

Example directory for use on cluster:
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/usr/local/bioinfo/src/RetroSeq/example_on_cluster

To submit: sbatch test_RetroSeq-1.5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.