SOFT : Porechop_ABI
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Site du soft: https://github.com/bonsai-team/Porechop_ABI
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Porechop_ABI
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Load binaries and environment:
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-> Version 46c37e5

#Need gcc compiler v7.2.0
module load compiler/gcc-7.2.0

module load bioinfo/Porechop_ABI-46c37e5

Warning! By default 16 cpu are used on the node. Don't forget to adjust -t option of porechop  command and --cpus-per-task for Slurm

Example directory for use on cluster:
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/usr/local/bioinfo/src/Porechop_ABI/example_on_cluster

To submit: sbatch test_Porechop_ABI-46c37e5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.