SOFT : Porechop
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Site du soft: https://github.com/rrwick/Porechop
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Porechop
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Load binaries and environment:
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-> Version v0.2.1

#Need gcc compiler v7.2.0
module load compiler/gcc-7.2.0

module load bioinfo/Porechop-0.2.1

-> Version v0.2.4

#Need gcc compiler v7.2.0
module load compiler/gcc-7.2.0

module load bioinfo/Porechop-0.2.4


Warning! By default 16 cpu are used on the node. Don't forget to adjust -t option of porechop  command and --cpus-per-task for Slurm

Example directory for use on cluster:
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/usr/local/bioinfo/src/Porechop/example_on_cluster

To submit: sbatch test_Porechop-0.2.1.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.