SOFT : ParGenes
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Site du soft: https://github.com/BenoitMorel/ParGenes
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/ParGenes
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Load binaries and environment:
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-> Version 97227e5

# If need MPI, python3
module load  compiler/gcc-7.2.0 mpi/openmpi-2.1.2-gcc-7.2.0 system/Python-3.6.3

module load bioinfo/ParGenes-97227e5

Warning! By default and at least 2 cpus are used on the node. Don't forget to adjust -c option of pargenes command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/ParGenes/example_on_cluster

To submit: sbatch test_ParGenes-97227e5-MPI.sh or sbatch test_ParGenes-97227e5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.