SOFT : PGDSpider
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Site du soft: http://www.cmpg.unibe.ch/software/PGDSpider/
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LICENSE:
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BSD 3-Clause License

See software documentation for more informations.

Location: /usr/local/bioinfo/src/PGDSpider
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Load binaries and environment:
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-> Version v2.1.1.5

module load bioinfo/PGDSpider_2.1.1.5

Execute PGDSpider GUI: PGDSpider2.sh (not on frontal servers)
Execute PGDSpider-cli (command line): 
java -Xmx1024m -Xms512m -jar $PGD_HOME/PGDSpider2-cli.jar ...
or use absolute path: 
java -Xmx1024m -Xms512m -jar /usr/local/bioinfo/src/PGDSpider/PGDSpider_2.1.1.5/PGDSpider2-cli.jar ...

Example directory for use on cluster:
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/usr/local/bioinfo/src/PGDSpider/example_on_cluster

To submit: sbatch test_PGDSpider_2.1.1.5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.