SOFT : PGDSpider ------ Site du soft: http://www.cmpg.unibe.ch/software/PGDSpider/ ------------- LICENSE: -------- BSD 3-Clause License See software documentation for more informations. Location: /usr/local/bioinfo/src/PGDSpider --------- Load binaries and environment: ------------------------------ -> Version v2.1.1.5 module load bioinfo/PGDSpider_2.1.1.5 Execute PGDSpider GUI: PGDSpider2.sh (not on frontal servers) Execute PGDSpider-cli (command line): java -Xmx1024m -Xms512m -jar $PGD_HOME/PGDSpider2-cli.jar ... or use absolute path: java -Xmx1024m -Xms512m -jar /usr/local/bioinfo/src/PGDSpider/PGDSpider_2.1.1.5/PGDSpider2-cli.jar ... Example directory for use on cluster: ------------------------------------- /usr/local/bioinfo/src/PGDSpider/example_on_cluster To submit: sbatch test_PGDSpider_2.1.1.5.sh See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.