SOFT : OrthoLoger ------ Site du soft: https://orthologer.ezlab.org/#getting-orthologer-software ------------- LICENSE: -------- GPL-v3 See software documentation for more informations. Location: /usr/local/bioinfo/src/OrthoLoger --------- Load binaries and environment: ------------------------------ -> Version v3.0.2 #In this order: #Need Miniconda 4.7.10 for mmseq2 module load system/Miniconda3-4.7.10 #Need gcc-9.3.0,mmseq2,Python-3.6.3, Blast+,cdhit, diamond <2.1.0 (https://gitlab.com/ezlab/orthologer_container/-/issues/4) module load compiler/gcc-9.3.0 bioinfo/mmseqs2-v13.45111 system/Python-3.6.3 bioinfo/ncbi-blast-2.13.0+ bioinfo/cdhit-4.8.1 bioinfo/diamond-v2.0.8 module load bioinfo/orthologer_3.0.2 Example directory for use on cluster: ------------------------------------- /usr/local/bioinfo/src/OrthoLoger/example_on_cluster To submit: sbatch test_orthologer_3.0.2.sh See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.