SOFT : LJA
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Site du soft: https://github.com/AntonBankevich/LJA
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LICENSE:
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BSD-3-Clause

See software documentation for more informations.

Location: /usr/local/bioinfo/src/LJA
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Load binaries and environment:
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-> Version v0.1

#Need Python-3.6.3, gcc-9.3.0
module load system/Python-3.6.3 compiler/gcc-9.3.0

module load bioinfo/LJA-v0.1

-> Version v0.2

#Need Python-3.6.3, gcc-9.3.0
module load system/Python-3.6.3 compiler/gcc-9.3.0

module load bioinfo/LJA-v0.2

Warning! By default 16 cpu are used on the node. Don't forget to adjust -t option of lja command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/LJA/example_on_cluster

To submit: sbatch test_LJA-v0.1.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.