SOFT : HiCLift
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Site du soft: https://github.com/XiaoTaoWang/HiCLift
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LICENSE:
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Free of charge to the academic research community for non-commercial research and educational purposes only. See https://github.com/XiaoTaoWang/HiCLift/blob/master/LICENSE

See software documentation for more informations.

Location: /usr/local/bioinfo/src/HiCLift
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Load binaries and environment:
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-> Version 1954645

#Need Miniconda
module load system/Miniconda3
module load bioinfo/HiCLift-1954645

Be careful, to unload, not use module purge but in order:

module unload bioinfo/HiCLift-1954645
module unload system/Miniconda3

Warning! By default 8 cpu are used on the node. Don't forget to adjust --nproc option of HiCLift command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/HiCLift/example_on_cluster

sbatch test_HiCLift-1954645.sh  (No data found, so just help option)

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.