SOFT : HG-CoLoR
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Site du soft: https://github.com/morispi/HG-CoLoR
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LICENSE:
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NC

See software documentation for more informations.

Location: /usr/local/bioinfo/src/HG-CoLoR
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Load binaries and environment:
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-> Version d476519

#Need gcc-7.2.0, Python-3.6.3, Emboss, Quorum and Jellyfish-2.2.10
module load compiler/gcc-7.2.0 system/Python-3.6.3 bioinfo/EMBOSS-6.6.0 bioinfo/jellyfish-2.2.10 bioinfo/quorum-1.1.1 

module load bioinfo/HG-CoLoR-d476519

Warning! By default all cpu are used on the node. Don't forget to adjust --nproc option of HG-CoLoR command and --cpus-per-task for Slurm

Example directory for use on cluster:
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/usr/local/bioinfo/src/HG-CoLoR/example_on_cluster (no dataset example found, so just help option)

To submit: sbatch test_HG-CoLoR-d476519.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.