SOFT : Gerbil
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Site du soft: https://github.com/uni-halle/gerbil
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Gerbil
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Load binaries and environment:
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-> Version 16eb578

module load bioinfo/gerbil-16eb578

Warning! In cpu mode, by default all cpu are used on the node. Don't forget to adjust -c option of bamstats command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/Gerbil/example_on_cluster

To submit: sbatch test_gerbil-16eb578.sh or sbatch test_gerbil-16eb578_GPU.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.