SOFT : GRIDSS ------ Site du soft: https://github.com/PapenfussLab/gridss ------------- LICENSE: -------- GPL-v3 See software documentation for more informations. Location: /usr/local/bioinfo/src/GRIDSS --------- Load binaries and environment: ------------------------------ -> Version v2.13.2 #Need Miniconda module load system/Miniconda3 module load bioinfo/gridss-2.13.2 To unload module, unload in order HiCExplorer module then Miniconda module: module unload bioinfo/gridss-2.13.2 module unload system/Miniconda3 Warning! By default 8 cpu are used on the node. Don't forget to adjust --threads option of gridss command and --cpus-per-task option for Slurm. Example directory for use on cluster: ------------------------------------- /usr/local/bioinfo/src/GRIDSS/example_on_cluster To submit: sbatch test_gridss-2.13.2.sh See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.