SOFT : CellRangerARC
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Site du soft: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/overview/welcome
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LICENSE:
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10x Genomics End User Software License Agreement:https://support.10xgenomics.com/single-cell-gene-expression/software/downloads/latest

See software documentation for more informations.

Location: /usr/local/bioinfo/src/CellRangerARC
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Load binaries and environment:
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-> Version v2.0.0

#Need bcl2fastq
module load bioinfo/bcl2fastq-2.20.0 

module load bioinfo/cellranger-arc-2.0.0

Example directory for use on cluster:
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/usr/local/bioinfo/src/CellRangerARC/example_on_cluster

To submit: sbatch test_cellranger-arc-2.0.0.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.