SOFT : Beagle ------ Site du soft: https://faculty.washington.edu/browning/beagle/beagle.html ------------- LICENSE: -------- GPL-v3 See software documentation for more informations. Location: /usr/local/bioinfo/src/Beagle --------- Load binaries and environment: ------------------------------ -> Version v4.0 module load bioinfo/Beagle_v4.0 java -Xmx4g -jar $BEAGLE ... or use absolute path java -Xmx4g -jar /usr/local/bioinfo/src/Beagle/Beagle_v4.0/beagle.r1399.jar ... -> Version v5.0 module load bioinfo/Beagle_v5.0 java -Xmx4g -jar $BEAGLE ... or use absolute path java -Xmx4g -jar /usr/local/bioinfo/src/Beagle/Beagle_v5.0/beagle.28Sep18.793.jar ... -> Version v4.1 module load bioinfo/Beagle_v4.1 java -Xmx4g -jar $BEAGLE ... or use absolute path java -Xmx4g -jar /usr/local/bioinfo/src/Beagle/Beagle_v4.1/beagle.27Jan18.7e1.jar ... Example directory for use on cluster: ------------------------------------- /usr/local/bioinfo/src/Beagle/example_on_cluster To submit: sbatch test_Beagle_v5.0.sh See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.